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BGISEQ 自主平台植物研究发表文章

物种文献名称期刊

发表时间                                                    
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鸡爪风Comparative transcriptome analysis of genes involved in response to thermal stress and leaf colour change of Acer palmatumScientia Horticulturae2019-05RNA-seq
水稻A nucleus-localized PPR protein OsNPPR1 is important for mitochondrial function and endosperm development in riceJournal of Experimental Botany2019-05RNAref
桃叶卫矛 Full genome sequence of a novel potexvirus from Euonymus bungeanus Maxim based on RNA-Seq analysisArchives of Virology2019-05RNA-seq
番茄Characterization the complete chloroplast genome of the tomato (Solanum lycopersicum L.) from ChinaMitochondrial DNA Part B2019-04小基因组
高粱Characterization of the complete chloroplast genome of the Chinese sorghum, Sorghum bicolor from ChinaMitochondrial DNA Part B2019-04小基因组
玉米VIVIPAROUS1 Interacts with ABA INSENSITIVE5 to Regulate GALACTINOL SYNTHASE2 Expression Controlling Seed Raffinose AccumulationJournal of agricultural and food chemistry2019-04RNA-seq
番茄Overexpression of the KNOX gene Tkn4 affects pollen development and confers sensitivity to gibberellin and auxin in tomatoPlant Science2019-04RNA-seq
蚕豆Identification and Characterization of Salt-Responsive MicroRNAs in Vicia faba by High-Throughput SequencingGenes2019-04miRNA-seq
拟南芥The H3K27me3 demethylase REF6 promotes leaf senescence through directly activating major senescence regulatory and functional genes in ArabidopsisPLoS genetics2019-04RNA-seq
玉米Transcriptome Dynamics of Double Recessive Mutant, o2o2o16o16, Reveals the Transcriptional Mechanisms in the Increase of Its Lysine and Tryptophan Content in MaizeGenes2019-04RNA-seq
苜蓿Full-length transcript sequencing and comparative transcriptomic analysis to evaluate the contribution of osmotic and ionic stress components towards salinity tolerance in the roots of cultivated alfalfa (Medicago sativa L.)BMC plant biology2019-04RNA-seq
大豆Integration of metabolome and transcriptome analyses highlights soybean roots responding to phosphorus deficiency by modulating phosphorylated metabolite processesPlant Physiology and Biochemistry2019-04RNA-seq
扁藻The complete chloroplast genome of Tetraselmis desikacharyi (Chlorodendrophyceae) and phylogenetic analysisMitochondrial DNA Part B2019-04小基因组
水稻Alterations in transcriptome and antioxidant activity of naturally aged mice exposed to selenium-rich riceEnviron Sci Pollut Res Int2019-04RNA-seq
骨条藻Complete chloroplast genome of the diatom Skeletonema pseudocostatum from the Western Mediterranean coast of AlgeriaMitochondrial DNA Part B2019-03小基因组
马蹄RNA-Seq analysis of gene expression during the yellowing developmental process of fresh-cut Chinese water chestnutsScientia Horticulturae2019-03RNA-seq
一串红Comparative transcriptomic analysis provides insights into the development of a Salvia splendens Ker-Gawler mutant, SX919MPLOS ONE2019-03RNA-seq
海藻Transcriptomic and lipidomic analysis of an EPA-containing Nannochloropsis sp. PJ12 in response to nitrogen deprivationScientific Reports2019-03RNA de novo
拟南芥Comparative physiological and transcriptomic analyses reveal the toxic effects of ZnO nanoparticles on plant growthEnvironmental science & technology2019-03RNA-seq
番茄SlMYB75, an MYB-type transcription factor, promotes anthocyanin accumulation and enhances volatile aroma production in tomato fruitsHorticulture Research2019-02RNA-seq
西洋参Characterization of the complete chloroplast genome of American ginseng, Panax quinquefolius LMitochondrial DNA Part B2019-02小基因组
楠木Characterization of the complete chloroplast genome of the Phoebe zhennan S. LeeMitochondrial DNA Part B2019-02小基因组
苹果Methylome and transcriptome analyses of apple fruit somatic mutations reveal the difference of red phenotypeBMC Genomics2019-02RNA-seq
玉米Molecular Mechanisms Underlying Increase in Lysine Content of Waxy Maize through the Introgression of the opaque2 AlleleInternational Journal of Molecular Sciences2019-02RNA-seq
茄子Comparative transcriptome analysis reveals K+ transporter gene contributing to salt tolerance in eggplantBMC Plant Biology2019-02RNA-seq
古RNAAncient RNA from Late Pleistocene permafrost and historical canids shows tissue-specific transcriptome survivalbioRxiv2019-02RNAref
番茄Sequencing and characterization the complete chloroplast genome of the potato, Solanum tuberosum LMitochondrial DNA Part B2019-02小基因组
欧洲油菜Transcriptome analysis of the irregular shape of shoot apical meristem in dt (dou tou) mutant of Brassica napus LMolecular Breeding2019-02RNA-seq
拟南芥The R2R3-MYB transcription factor MYB49 regulates cadmium accumulationPlant Physiology2019-02RNA-seq
水稻OsHLH61-OsbHLH96 influences rice defense to brown planthopper through regulating the pathogen-related genesRice2019-02RNA-seq
桃子 A single nucleotide mutation in GID 1c disrupts its interaction with DELLA 1 and causes a GA‐insensitive dwarf phenotype in peachPlant Biotechnology Journal2019-02RNA-seq
Combination of iTRAQ proteomics and RNA-seq transcriptomics reveals jasmonate-related-metabolisms central regulation during the process of Jujube witches’ broom recovery by tetracycline treatmentScientia Horticulturae2019-01转录组
苦皮藤De novo leaf and root transcriptome analysis to explore biosynthetic pathway of Celangulin V in Celastrus angulatus maximBMC genomics2019-01转录组
烟草Tolerance of Transplastomic Tobacco Plants Overexpressing a Theta Class Glutathione Transferase to Abiotic and Oxidative StressesFront. Plant Sci2019-01转录组
十字花科The complete plastid genomes of four species from BrassicalesMitochondrial DNA Part B2019-01小基因组
番茄Overexpression of the KNOX gene Tkn4 affects pollen development and confers sensitivity to gibberellin and auxin in tomatoPlant Science2019-01RNA-seq
番茄A tomato B‐box protein SlBBX20 modulates carotenoid biosynthesis by directly activating PHYTOENE SYNTHASE 1, and is targeted for 26S proteasome‐mediated degradationNew Phytologist2019-01RNA-seq
芥菜Chromosome level comparative analysis of Brassica genomesPlant Molecular Biology2019-01基因组Hi-C
水稻The basic helix‐loop‐helix transcription factor, OsPIL15 regulates grain size via directly targeting a purine permease gene OsPUP7 in ricePlant Biotechnology Journal2019-01RNA-seq
拟南芥Functional analysis for domains of maize PPR protein EMP5 in RNA editing and plant development in ArabidopsisPlant Growth Regulation 2019-01RNAref
印度尼西亚水果Datasets for genome assembly of six underutilized Indonesian fruitsData in Brief2019-01基因组
水稻Expression of Maize MADS Transcription Factor ZmES22 Negatively Modulates Starch Accumulation in Rice EndospermInternational journal of molecular sciences2019-01RNA-seq
维管植物Molecular digitization of a botanical garden: high-depth whole genome sequencing of 689 vascular plant species from the Ruili Botanical GardenGigaScience 2019-01基因组
大麦Transcriptomic comparison of two barley genotypes differing in arsenic tolerance exposed to arsenate and phosphate treatmentsPlant Physiology and Biochemistry2018-9转录组
黄瓜Differential Gene Expression Caused by the F and M Loci Provides Insight Into Ethylene-Mediated Female Flower Differentiation in CucumberFront. Plant Sci.2018-8RNAref
拟南芥Comparative performance of the BGISEQ-500 and Illumina HiSeq4000 sequencing platforms for transcriptome analysis in plantsPlant Methods2018-8转录组
水稻Modulating plant growth–metabolism coordination for sustainable agricultureNature2018-8RNA-Seq&ChIP-Seq
番茄Comparative Transcriptome Profiling of Two Tomato Genotypes in Response to Potassium-Deficiency Stress.International Journal of Molecular Sciences.2018-8RNA-Seq
紫甘蓝、芥蓝Maintenance of grafting-induced epigenetic variations in the asexual progeny of Brassica oleracea and B. juncea chimeraPlant J2018-8Small RNA
番茄Expression of grape ACS1 in tomato decreases ethylene and alters the balance between auxin and ethylene during shoot and root formation
Journal of Plant Physiology

2018-6RNA-seq
龙血树Complete plastome sequence of Dracaena cambodiana (Asparagaceae): a species considered “Vulnerable” in Southeast AsiaMitochondrial DNA Part B2018-5质体DNA
拟南芥Overexpression of VaWRKY14 increases drought tolerance in Arabidopsis by modulating the expression of stress-related genesPlant Cell Reports2018-5RNA-seq
盐芥Compositional and transcriptomic analysis associated with cuticle lipid production on rosette and inflorescence stem leaves in the extremophyte Thellungiella salsuginea   physiologia plantarum   2018-5RNA-seq
水稻DDM1 represses noncoding RNA expression and RNA-directed DNA methylation in heterochromatinPlant Physiology2018-5Small RNA
卡瓦胡椒The biosynthetic origin of psychoactive kavalactones in kavabioRxiv2018-4转录组 de novo
拟南芥Hydrogen peroxide positively regulates brassinosteroid signaling through oxidation of the BRASSINAZOLE-RESISTANT1 transcription factorNature Communications 2018-3RNA-seq
番茄Transcriptome resequencing analysis of the responses of Ty5-Mediated resistance to TYLCV via in resistant vs. susceptible tomato cultivarsPeerJ 2018-2转录组重测序
花生Comparative transcriptome analysis revealed key factors for differential cadmium transport and retention in roots of two contrasting peanut cultivarsBMC genomics2018-12RNAref
盐生草Comparative transcriptome analysis of genes involved in Na+ transport in the leaves of halophyte Halogeton glomeratusGene2018-12转录组
紫花苜蓿Comparative Transcriptomic and Physiological Analyses of Medicago sativa L. Indicates that Multiple Regulatory Networks Are Activated during Continuous ABA Treatment.Int J Mol Sci.2018-12转录组
苜蓿Multiple Regulatory Networks Are Activated during Cold Stress in Medicago sativa L.Int J Mol Sci.2018-10RNA de novo
拟南芥Phytochrome A Negatively Regulates the Shade Avoidance Response by Increasing Auxin/Indole Acidic Acid Protein StabilityDevelopmental Cell2018-1RNA-Seq
西瓜Comparative transcriptome analysis reveals key genes potentially related to soluble sugar and organic acid accumulation in watermelonPLOS ONE2018-1RNA-Seq
青蒿A novel HD-ZIP IV/MIXTA complex promotes glandular trichome initiation and cuticle development in Artemisia annuaNew Phytologist2018-1RNA-Seq
拟南芥The GARP/MYB-related grape transcription factor AQUILO improves cold tolerance and promotes the accumulation of raffinose family oligosaccharidesJournal of Experimental Botany2018-1RNA-seq
拟南芥Arabidopsis thaliana ACS8 plays a crucial role in the early biosynthesis of ethylene elicited by Cu2+ ionsJOURNAL OF CELL SCIENCE2018-1RNA-seq
苎麻
Gene expression profiling of ramie roots during hydroponic
induction and adaption to aquatic environment
Genomics Data2017-12RNA-Seq
盐生草Transcriptome sequencing and comparative analysis of differentially-expressed isoforms in the roots of Halogeton glomeratus under salt stressGene2017-12RNA-Seq
拟南芥AtACS8 plays a critical role in the early biosynthesis of ethylene elicited by copper ions in ArabidopsisJournal of Cell Science2017-08RNA-Seq
油菜Genome-scale mRNA transcriptomic insights into the responses of oilseed rape (Brassica napus L.) to varying boron availabilitiesPlant and Soil2017-07RNA-Seq
大花红景天Draft genome sequence of the Tibetan medicinal herb, Rhodiola crenulataGigaScience2017-05RNA-Seq
水稻Overexpression of OsHSP18.0-CI Enhances Resistance to Bacterial Leaf Streak in RiceRice2017-04RNA-Seq

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