BGISEQ 自主平台植物研究发表文章
| 物种 | 文献名称 | 期刊 | 发表时间 | 产品 |
| 鸡爪风 | Comparative transcriptome analysis of genes involved in response to thermal stress and leaf colour change of Acer palmatum | Scientia Horticulturae | 2019-05 | RNA-seq |
| 水稻 | A nucleus-localized PPR protein OsNPPR1 is important for mitochondrial function and endosperm development in rice | Journal of Experimental Botany | 2019-05 | RNAref |
| 桃叶卫矛 | Full genome sequence of a novel potexvirus from Euonymus bungeanus Maxim based on RNA-Seq analysis | Archives of Virology | 2019-05 | RNA-seq |
| 番茄 | Characterization the complete chloroplast genome of the tomato (Solanum lycopersicum L.) from China | Mitochondrial DNA Part B | 2019-04 | 小基因组 |
| 高粱 | Characterization of the complete chloroplast genome of the Chinese sorghum, Sorghum bicolor from China | Mitochondrial DNA Part B | 2019-04 | 小基因组 |
| 玉米 | VIVIPAROUS1 Interacts with ABA INSENSITIVE5 to Regulate GALACTINOL SYNTHASE2 Expression Controlling Seed Raffinose Accumulation | Journal of agricultural and food chemistry | 2019-04 | RNA-seq |
| 番茄 | Overexpression of the KNOX gene Tkn4 affects pollen development and confers sensitivity to gibberellin and auxin in tomato | Plant Science | 2019-04 | RNA-seq |
| 蚕豆 | Identification and Characterization of Salt-Responsive MicroRNAs in Vicia faba by High-Throughput Sequencing | Genes | 2019-04 | miRNA-seq |
| 拟南芥 | The H3K27me3 demethylase REF6 promotes leaf senescence through directly activating major senescence regulatory and functional genes in Arabidopsis | PLoS genetics | 2019-04 | RNA-seq |
| 玉米 | Transcriptome Dynamics of Double Recessive Mutant, o2o2o16o16, Reveals the Transcriptional Mechanisms in the Increase of Its Lysine and Tryptophan Content in Maize | Genes | 2019-04 | RNA-seq |
| 苜蓿 | Full-length transcript sequencing and comparative transcriptomic analysis to evaluate the contribution of osmotic and ionic stress components towards salinity tolerance in the roots of cultivated alfalfa (Medicago sativa L.) | BMC plant biology | 2019-04 | RNA-seq |
| 大豆 | Integration of metabolome and transcriptome analyses highlights soybean roots responding to phosphorus deficiency by modulating phosphorylated metabolite processes | Plant Physiology and Biochemistry | 2019-04 | RNA-seq |
| 扁藻 | The complete chloroplast genome of Tetraselmis desikacharyi (Chlorodendrophyceae) and phylogenetic analysis | Mitochondrial DNA Part B | 2019-04 | 小基因组 |
| 水稻 | Alterations in transcriptome and antioxidant activity of naturally aged mice exposed to selenium-rich rice | Environ Sci Pollut Res Int | 2019-04 | RNA-seq |
| 骨条藻 | Complete chloroplast genome of the diatom Skeletonema pseudocostatum from the Western Mediterranean coast of Algeria | Mitochondrial DNA Part B | 2019-03 | 小基因组 |
| 马蹄 | RNA-Seq analysis of gene expression during the yellowing developmental process of fresh-cut Chinese water chestnuts | Scientia Horticulturae | 2019-03 | RNA-seq |
| 一串红 | Comparative transcriptomic analysis provides insights into the development of a Salvia splendens Ker-Gawler mutant, SX919M | PLOS ONE | 2019-03 | RNA-seq |
| 海藻 | Transcriptomic and lipidomic analysis of an EPA-containing Nannochloropsis sp. PJ12 in response to nitrogen deprivation | Scientific Reports | 2019-03 | RNA de novo |
| 拟南芥 | Comparative physiological and transcriptomic analyses reveal the toxic effects of ZnO nanoparticles on plant growth | Environmental science & technology | 2019-03 | RNA-seq |
| 番茄 | SlMYB75, an MYB-type transcription factor, promotes anthocyanin accumulation and enhances volatile aroma production in tomato fruits | Horticulture Research | 2019-02 | RNA-seq |
| 西洋参 | Characterization of the complete chloroplast genome of American ginseng, Panax quinquefolius L | Mitochondrial DNA Part B | 2019-02 | 小基因组 |
| 楠木 | Characterization of the complete chloroplast genome of the Phoebe zhennan S. Lee | Mitochondrial DNA Part B | 2019-02 | 小基因组 |
| 苹果 | Methylome and transcriptome analyses of apple fruit somatic mutations reveal the difference of red phenotype | BMC Genomics | 2019-02 | RNA-seq |
| 玉米 | Molecular Mechanisms Underlying Increase in Lysine Content of Waxy Maize through the Introgression of the opaque2 Allele | International Journal of Molecular Sciences | 2019-02 | RNA-seq |
| 茄子 | Comparative transcriptome analysis reveals K+ transporter gene contributing to salt tolerance in eggplant | BMC Plant Biology | 2019-02 | RNA-seq |
| 古RNA | Ancient RNA from Late Pleistocene permafrost and historical canids shows tissue-specific transcriptome survival | bioRxiv | 2019-02 | RNAref |
| 番茄 | Sequencing and characterization the complete chloroplast genome of the potato, Solanum tuberosum L | Mitochondrial DNA Part B | 2019-02 | 小基因组 |
| 欧洲油菜 | Transcriptome analysis of the irregular shape of shoot apical meristem in dt (dou tou) mutant of Brassica napus L | Molecular Breeding | 2019-02 | RNA-seq |
| 拟南芥 | The R2R3-MYB transcription factor MYB49 regulates cadmium accumulation | Plant Physiology | 2019-02 | RNA-seq |
| 水稻 | OsHLH61-OsbHLH96 influences rice defense to brown planthopper through regulating the pathogen-related genes | Rice | 2019-02 | RNA-seq |
| 桃子 | A single nucleotide mutation in GID 1c disrupts its interaction with DELLA 1 and causes a GA‐insensitive dwarf phenotype in peach | Plant Biotechnology Journal | 2019-02 | RNA-seq |
| 枣 | Combination of iTRAQ proteomics and RNA-seq transcriptomics reveals jasmonate-related-metabolisms central regulation during the process of Jujube witches’ broom recovery by tetracycline treatment | Scientia Horticulturae | 2019-01 | 转录组 |
| 苦皮藤 | De novo leaf and root transcriptome analysis to explore biosynthetic pathway of Celangulin V in Celastrus angulatus maxim | BMC genomics | 2019-01 | 转录组 |
| 烟草 | Tolerance of Transplastomic Tobacco Plants Overexpressing a Theta Class Glutathione Transferase to Abiotic and Oxidative Stresses | Front. Plant Sci | 2019-01 | 转录组 |
| 十字花科 | The complete plastid genomes of four species from Brassicales | Mitochondrial DNA Part B | 2019-01 | 小基因组 |
| 番茄 | Overexpression of the KNOX gene Tkn4 affects pollen development and confers sensitivity to gibberellin and auxin in tomato | Plant Science | 2019-01 | RNA-seq |
| 番茄 | A tomato B‐box protein SlBBX20 modulates carotenoid biosynthesis by directly activating PHYTOENE SYNTHASE 1, and is targeted for 26S proteasome‐mediated degradation | New Phytologist | 2019-01 | RNA-seq |
| 芥菜 | Chromosome level comparative analysis of Brassica genomes | Plant Molecular Biology | 2019-01 | 基因组Hi-C |
| 水稻 | The basic helix‐loop‐helix transcription factor, OsPIL15 regulates grain size via directly targeting a purine permease gene OsPUP7 in rice | Plant Biotechnology Journal | 2019-01 | RNA-seq |
| 拟南芥 | Functional analysis for domains of maize PPR protein EMP5 in RNA editing and plant development in Arabidopsis | Plant Growth Regulation | 2019-01 | RNAref |
| 印度尼西亚水果 | Datasets for genome assembly of six underutilized Indonesian fruits | Data in Brief | 2019-01 | 基因组 |
| 水稻 | Expression of Maize MADS Transcription Factor ZmES22 Negatively Modulates Starch Accumulation in Rice Endosperm | International journal of molecular sciences | 2019-01 | RNA-seq |
| 维管植物 | Molecular digitization of a botanical garden: high-depth whole genome sequencing of 689 vascular plant species from the Ruili Botanical Garden | GigaScience | 2019-01 | 基因组 |
| 大麦 | Transcriptomic comparison of two barley genotypes differing in arsenic tolerance exposed to arsenate and phosphate treatments | Plant Physiology and Biochemistry | 2018-9 | 转录组 |
| 黄瓜 | Differential Gene Expression Caused by the F and M Loci Provides Insight Into Ethylene-Mediated Female Flower Differentiation in Cucumber | Front. Plant Sci. | 2018-8 | RNAref |
| 拟南芥 | Comparative performance of the BGISEQ-500 and Illumina HiSeq4000 sequencing platforms for transcriptome analysis in plants | Plant Methods | 2018-8 | 转录组 |
| 水稻 | Modulating plant growth–metabolism coordination for sustainable agriculture | Nature | 2018-8 | RNA-Seq&ChIP-Seq |
| 番茄 | Comparative Transcriptome Profiling of Two Tomato Genotypes in Response to Potassium-Deficiency Stress. | International Journal of Molecular Sciences. | 2018-8 | RNA-Seq |
| 紫甘蓝、芥蓝 | Maintenance of grafting-induced epigenetic variations in the asexual progeny of Brassica oleracea and B. juncea chimera | Plant J | 2018-8 | Small RNA |
| 番茄 | Expression of grape ACS1 in tomato decreases ethylene and alters the balance between auxin and ethylene during shoot and root formation | Journal
of Plant Physiology | 2018-6 | RNA-seq |
| 龙血树 | Complete plastome sequence of Dracaena cambodiana (Asparagaceae): a species considered “Vulnerable” in Southeast Asia | Mitochondrial DNA Part B | 2018-5 | 质体DNA |
| 拟南芥 | Overexpression of VaWRKY14 increases drought tolerance in Arabidopsis by modulating the expression of stress-related genes | Plant Cell Reports | 2018-5 | RNA-seq |
| 盐芥 | Compositional and transcriptomic analysis associated with cuticle lipid production on rosette and inflorescence stem leaves in the extremophyte Thellungiella salsuginea | physiologia plantarum | 2018-5 | RNA-seq |
| 水稻 | DDM1 represses noncoding RNA expression and RNA-directed DNA methylation in heterochromatin | Plant Physiology | 2018-5 | Small RNA |
| 卡瓦胡椒 | The biosynthetic origin of psychoactive kavalactones in kava | bioRxiv | 2018-4 | 转录组 de novo |
| 拟南芥 | Hydrogen peroxide positively regulates brassinosteroid signaling through oxidation of the BRASSINAZOLE-RESISTANT1 transcription factor | Nature Communications | 2018-3 | RNA-seq |
| 番茄 | Transcriptome resequencing analysis of the responses of Ty5-Mediated resistance to TYLCV via in resistant vs. susceptible tomato cultivars | PeerJ | 2018-2 | 转录组重测序 |
| 花生 | Comparative transcriptome analysis revealed key factors for differential cadmium transport and retention in roots of two contrasting peanut cultivars | BMC genomics | 2018-12 | RNAref |
| 盐生草 | Comparative transcriptome analysis of genes involved in Na+ transport in the leaves of halophyte Halogeton glomeratus | Gene | 2018-12 | 转录组 |
| 紫花苜蓿 | Comparative Transcriptomic and Physiological Analyses of Medicago sativa L. Indicates that Multiple Regulatory Networks Are Activated during Continuous ABA Treatment. | Int J Mol Sci. | 2018-12 | 转录组 |
| 苜蓿 | Multiple Regulatory Networks Are Activated during Cold Stress in Medicago sativa L. | Int J Mol Sci. | 2018-10 | RNA de novo |
| 拟南芥 | Phytochrome A Negatively Regulates the Shade Avoidance Response by Increasing Auxin/Indole Acidic Acid Protein Stability | Developmental Cell | 2018-1 | RNA-Seq |
| 西瓜 | Comparative transcriptome analysis reveals key genes potentially related to soluble sugar and organic acid accumulation in watermelon | PLOS ONE | 2018-1 | RNA-Seq |
| 青蒿 | A novel HD-ZIP IV/MIXTA complex promotes glandular trichome initiation and cuticle development in Artemisia annua | New Phytologist | 2018-1 | RNA-Seq |
| 拟南芥 | The GARP/MYB-related grape transcription factor AQUILO improves cold tolerance and promotes the accumulation of raffinose family oligosaccharides | Journal of Experimental Botany | 2018-1 | RNA-seq |
| 拟南芥 | Arabidopsis thaliana ACS8 plays a crucial role in the early biosynthesis of ethylene elicited by Cu2+ ions | JOURNAL OF CELL SCIENCE | 2018-1 | RNA-seq |
| 苎麻 | Gene
expression profiling of ramie roots during hydroponic induction and adaption to aquatic environment | Genomics Data | 2017-12 | RNA-Seq |
| 盐生草 | Transcriptome sequencing and comparative analysis of differentially-expressed isoforms in the roots of Halogeton glomeratus under salt stress | Gene | 2017-12 | RNA-Seq |
| 拟南芥 | AtACS8 plays a critical role in the early biosynthesis of ethylene elicited by copper ions in Arabidopsis | Journal of Cell Science | 2017-08 | RNA-Seq |
| 油菜 | Genome-scale mRNA transcriptomic insights into the responses of oilseed rape (Brassica napus L.) to varying boron availabilities | Plant and Soil | 2017-07 | RNA-Seq |
| 大花红景天 | Draft genome sequence of the Tibetan medicinal herb, Rhodiola crenulata | GigaScience | 2017-05 | RNA-Seq |
| 水稻 | Overexpression of OsHSP18.0-CI Enhances Resistance to Bacterial Leaf Streak in Rice | Rice | 2017-04 | RNA-Seq |
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